analyze_stereochemistry

MCP tool from PubChem MCP Server by Augmented-Nature

Chirality and isomer analysis

How to use it

analyze_stereochemistry is exposed by the PubChem MCP Server MCP server. Add the server to your MCP client (Claude Desktop, Cursor, Windsurf and others), and the analyze_stereochemistry tool becomes available to the model automatically. See the full listing for setup details and every tool this server provides.

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Other tools in PubChem MCP Server (29)

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calculate_descriptors

Comprehensive molecular descriptors

compare_activity_profiles

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3D structural information

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Detailed compound information by CID

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get_external_references

Links to ChEMBL, DrugBank, etc.

get_literature_references

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get_pharmacophore_features

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get_safety_data

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search_by_cas_number

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Exact SMILES string matching

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search_compounds

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superstructure_search

Find larger compounds containing query