save_image
Save the active image to a new exact lowercase supported path.
How to use it
Project documentation lists save_image for the Fiji ImageJ MCP MCP server. Add the server to your MCP client (Claude Desktop, Cursor, Windsurf and others), then check which tools your installed version makes available. Tool availability can depend on configuration and credentials. A server handshake does not verify this tool’s behavior. See the full listing for setup details.
Install Fiji ImageJ MCP
/absolute/path/to/fiji-mcp-serverOther tools in Fiji ImageJ MCP (8)
Compare two saved raster paths visually and, when sizes match, numerically.
Read an ordered, paginated page from Fiji's live Results table.
Read Fiji lifecycle, active/open images, and Results-table state.
Open an existing local image and make it current.
Run one resolved installed command with supported parameters or options.
Run one trusted IJM or Groovy script.
Return and optionally save a PNG of the active plane or Results.
Search registered SciJava and ImageJ1 commands and inspect their routes.