Pubchem MCP Server
未认领Search the PubChem chemical database for compounds, properties, safety data, bioactivity, cross-references, and entity summaries via MCP. STDIO or Streamable HTTP.
安装
docker run -p 3010:3010 pubchem-mcp-server更多Databases服务器
浏览完整目录安全概况
已认领和已认证的服务器每周接受一次静态扫描，显示代码能触及的范围（外部服务、环境变量、shell 命令、代理配置目录）以及带有已知公告的依赖。认领此列表即可获得。 安全概况的工作原理
11 个工具中显示 11 个
文档中列出的工具 (11)
内容来自项目文档。服务器握手不会验证每个工具的说明或行为。
maxAtoms
/maxBonds bound the atom/bond preview and includeRawSdf opts into a large raw SDF past the safe line cap; atomCount/bondCount always report the totals and any capping is disclosed
pubchem_get_bioactivity
Get a compound's bioactivity profile: assay results, targets, and activity values; filter by outcome or molecular target.
pubchem_get_compound_3d_structure
Fetch a 3D conformer (atomic coordinates and bonds) for a compound by CID, as parsed JSON or raw SDF.
pubchem_get_compound_details
Get physicochemical properties, descriptions, synonyms, drug-likeness, and classification for compounds by CID.
pubchem_get_compound_image
Fetch a 2D structure diagram (PNG) for a compound by CID.
pubchem_get_compound_interactions
Get drug-drug, drug-food, and chemical-target interactions for a compound by CID.
pubchem_get_compound_safety
Get GHS hazard classification and safety data for one or more compounds by CID (batch).
pubchem_get_compound_xrefs
Get external database cross-references (PubMed, patents, genes, proteins, etc.).
pubchem_get_summary
Get summaries for PubChem entities: assays, genes, proteins, taxonomy.
pubchem_search_assays
Find bioassays by biological target (gene symbol, protein, Gene ID, UniProt accession).
pubchem_search_compounds
Search for compounds by name, SMILES, InChIKey, formula, substructure, superstructure, or 2D similarity.